Apologies, did not mean to imply that the 3261 was an option as, Correct, the bolt is too big for the 6.5's spin-on water pump. Just wanted to make the point that the EV clutch in general looks like it has success in a diesel application.
In re-reading the first post, not sold that the Motorcraft YA250 is the best option as the motors it goes with are gassers with ~5,500 RPM redlines where the fan likely has a more fine pitch than what a lower revving diesel needs.
Based on appearance, a possible fan option is the YA245 from the 6.0 PS. Another one for trial-by-error is YA255 from a 7.3 PS, but based on pics it might not fit the 3264.
If the Derale controller can automatically lock the fan at 100%, this might compensate for any pitch difference with the YA250. In looking over the Derale controller's instructions, it might only get to 60% running speed unless manually engaging the 'Override Circuit'. Presuming the Derale controller cannot get to 100% running speed without manually engaging the 'Override Circuit', might want to consider Hayden's controller which will automatically spin the fan at 100% when temperatures go 10F over the set point and then drop back to 60% at the set point.